BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C06LP1|AL427457
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1216 1279 0.0
3x_Contig767 550 e-156
>3x_Contig1216
Length = 5132
Score = 1279 bits (644), Expect = 0.0
Identities = 653/656 (99%), Gaps = 1/656 (0%)
Strand = Plus / Minus
Query: 1 tgttttcaatagctttgccagatagaatgccgtgggtaacgatagcaatgacggacttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tgttttcaatagctttgccagatagaatgccgtgggtaacgatagcaatgacggacttgg 597
Query: 61 ctttgttttccaacagaacttctgcagccttagccaaagtaccacatgtatcagccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ctttgttttccaacagaacttctgcagccttagccaaagtaccacatgtatcagccatat 537
Query: 121 catcaacaatgatacaaatcttgtctgagacgtcaccaacaaggaccattcttgaaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 catcaacaatgatacaaatcttgtctgagacgtcaccaacaaggaccattcttgaaactt 477
Query: 181 cattagcgcgagctctttccttatgaatcaaggcaaagttcaaatccaaacggtcggcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cattagcgcgagctctttccttatgaatcaaggcaaagttcaaatccaaacggtcggcca 417
Query: 241 aaccagcggcacgtttggcaccaccagcatccggggagataatgatagcttctttgaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaccagcggcacgtttggcaccaccagcatccggggagataatgatagcttctttgaagt 357
Query: 301 taacattttccttaatatatcttacaactgaaggctcagcatataagttatctactggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 taacattttccttaatatatcttacaactgaaggctcagcatataagttatctactggaa 297
Query: 361 catcaaagaacccttgtatttgagaagcgtgcaagtccatggtgatgacatggtcacaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 catcaaagaacccttgtatttgagaagcgtgcaagtccatggtgatgacatggtcacaac 237
Query: 421 cagcagtggtcagcatgtyagccatcaacttagcagtaattggagcacgagacttatcct 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cagcagtggtcagcatgtcagccatcaacttagcagtaattggagcacgagacttatcct 177
Query: 481 ttctatcctgtctagcgtatgggaaatttggaataatagctgtwattcttctagcagacg 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 176 ttctatcctgtctagcgtatgggaaatttggaataatagctgtaattcttctagcagacg 117
Query: 541 cggtctttgatgcattaatcattattaatagctcaaggacacgatcattcacatcaccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cggtctttgatgcattaatcattattaatagctcaaggacacgatcattcacatcaccag 57
Query: 601 atccgatctgtgtaacaatgaagatatctt-ggtctctaacagattcaccaatgga 655
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 56 atccgatctgtgtaacaatgaagatatcttgggtctctaacagattcaccaatgga 1
>3x_Contig767
Length = 1770
Score = 550 bits (277), Expect = e-156
Identities = 288/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 701 aagcttcaaacctaacctcttagcaactaactcggctaggttacgatgcacatcgggagc 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcttcaaacctaacctcttagcaactaactcggctaggttacgatgcacatcgggagc 60
Query: 761 caaaagcttgatagaattggttgccattttcttatcagtattgaaaagtgtttaaatgat 820
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 caaaagcttgatagaattggttgccattttcttatcagtattgacaagtgtttaaatgat 120
Query: 821 gtgtttgttataacagtttgcttatttttcttcacaaaactgaagtacgagggggtatgt 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgtttgttataacagtttgcttatttttcttcacaaaactgaagtacgagggggtatgt 180
Query: 881 gaatcgaatcaggagcacaaacgaagcagattacctagttcaagccaaaa-caaacctgc 939
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 gaatcgaatcaggagcacaaacgaagcagattacctagttcaagccaaaaccaaacctgc 240
Query: 940 ctatttcctcccaacttcaaacatcttcatcttaagtyttttcatcaaaaa 990
||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 ctatttcctcccaacttcaaacatcttcatcttaagtcttttcatcaaaaa 291
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7284
Number of Sequences: 1807
Number of extensions: 7284
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)